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» Estimating dynamic models for gene regulation networks
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RECOMB
2005
Springer
14 years 7 months ago
Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data
: A series of genome-scale algorithms and high-performance implementations is described and shown to be useful in the genetic analysis of gene transcription. With them it is possib...
Elissa J. Chesler, Michael A. Langston
BMCBI
2010
153views more  BMCBI 2010»
13 years 6 months ago
DiffCoEx: a simple and sensitive method to find differentially coexpressed gene modules
Background: Large microarray datasets have enabled gene regulation to be studied through coexpression analysis. While numerous methods have been developed for identifying differen...
Bruno M. Tesson, Rainer Breitling, Ritsert C. Jans...
BMCBI
2005
153views more  BMCBI 2005»
13 years 7 months ago
A comparative review of estimates of the proportion unchanged genes and the false discovery rate
Background: In the analysis of microarray data one generally produces a vector of p-values that for each gene give the likelihood of obtaining equally strong evidence of change by...
Per Broberg
CMSB
2011
Springer
12 years 7 months ago
The singular power of the environment on stochastic nonlinear threshold Boolean automata networks
Abstract. This paper tackles theoretically the question of the structural stability of biological regulation networks subjected to the influence of their environment. The model of...
Jacques Demongeot, Sylvain Sené
CEC
2003
IEEE
13 years 11 months ago
Dynamics of gene expression in an artificial genome
Abstract- Complex systems techniques provide a powerful tool to study the emergent properties of networks of interacting genes. In this study we extract models of genetic regulator...
Kai Willadsen, Janet Wiles