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    » Estimating dynamic models for gene regulation networks
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    BMCBI
    2010
    144views more  BMCBI 2010»
    Super-sparse principal component analyses for high-throughput genomic data
    13 years 7 months ago
    Super-sparse principal component analyses for high-throughput genomic data
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    Background: Principal component analysis (PCA) has gained popularity as a method for the analysis of highdimensional genomic data. However, it is often difficult to interpret the ...
    Donghwan Lee, Woojoo Lee, Youngjo Lee, Yudi Pawita...
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    RECOMB
    2005
    Springer
    118views Computational Biology» more  RECOMB 2005»
    An Interaction-Dependent Model for Transcription Factor Binding
    14 years 7 months ago
    An Interaction-Dependent Model for Transcription Factor Binding
    Download  www-stat.wharton.upenn.edu
    Transcriptional regulation is accomplished by several transcription factor proteins that bind to specific DNA elements in the relative vicinity of the gene, and interact with each ...
    Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli
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    BMCBI
    2008
    146views more  BMCBI 2008»
    A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
    13 years 7 months ago
    A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
    Download  www.biomedcentral.com
    Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
    Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha
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    BMCBI
    2010
    109views more  BMCBI 2010»
    Application of machine learning methods to histone methylation ChIP-Seq data reveals H4R3me2 globally represses gene expression
    13 years 7 months ago
    Application of machine learning methods to histone methylation ChIP-Seq data reveals H4R3me2 globally represses gene expression
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    Background: In the last decade, biochemical studies have revealed that epigenetic modifications including histone modifications, histone variants and DNA methylation form a comple...
    Xiaojiang Xu, Stephen Hoang, Marty W. Mayo, Stefan...
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    CORR
    2008
    Springer
    115views Education» more  CORR 2008»
    Positive circuits and maximal number of fixed points in discrete dynamical systems
    13 years 7 months ago
    Positive circuits and maximal number of fixed points in discrete dynamical systems
    Download  www.i3s.unice.fr
    We consider a product X of n finite intervals of integers, a map F from X to itself, the asynchronous state transition graph (F) on X that Thomas proposed as a model for the dynam...
    Adrien Richard
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