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BMCBI
2008
173views more  BMCBI 2008»
13 years 7 months ago
Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
Background: Microarray experiments measure changes in the expression of thousands of genes. The resulting lists of genes with changes in expression are then searched for biologica...
Stephen W. Tanner, Pankaj Agarwal
BMCBI
2010
161views more  BMCBI 2010»
13 years 7 months ago
CGHpower: exploring sample size calculations for chromosomal copy number experiments
Background: Determining a suitable sample size is an important step in the planning of microarray experiments. Increasing the number of arrays gives more statistical power, but ad...
Ilari Scheinin, Jose A. Ferreira, Sakari Knuutila,...
WWW
2005
ACM
14 years 8 months ago
Scaling link-based similarity search
To exploit the similarity information hidden in the hyperlink structure of the web, this paper introduces algorithms scalable to graphs with billions of vertices on a distributed ...
Balázs Rácz, Dániel Fogaras
SIGMOD
2006
ACM
232views Database» more  SIGMOD 2006»
14 years 7 months ago
To search or to crawl?: towards a query optimizer for text-centric tasks
Text is ubiquitous and, not surprisingly, many important applications rely on textual data for a variety of tasks. As a notable example, information extraction applications derive...
Panagiotis G. Ipeirotis, Eugene Agichtein, Pranay ...
CGO
2010
IEEE
14 years 14 days ago
Taming hardware event samples for FDO compilation
Feedback-directed optimization (FDO) is effective in improving application runtime performance, but has not been widely adopted due to the tedious dual-compilation model, the difï...
Dehao Chen, Neil Vachharajani, Robert Hundt, Shih-...