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» Evaluating Dynamic Services in Bioinformatics
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ADBIS
2006
Springer
182views Database» more  ADBIS 2006»
14 years 3 months ago
A Middleware-Based Approach to Database Caching
Database caching supports declarative query processing close to the application. Using a full-fledged DBMS as cache manager, it enables the evaluation of specific project-select-...
Andreas Bühmann, Theo Härder, Christian ...
BMCBI
2006
139views more  BMCBI 2006»
13 years 10 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
BMCBI
2004
229views more  BMCBI 2004»
13 years 9 months ago
Automatic annotation of protein motif function with Gene Ontology terms
Background: Conserved protein sequence motifs are short stretches of amino acid sequence patterns that potentially encode the function of proteins. Several sequence pattern search...
Xinghua Lu, Chengxiang Zhai, Vanathi Gopalakrishna...
SSDBM
2008
IEEE
149views Database» more  SSDBM 2008»
14 years 4 months ago
Query Planning for Searching Inter-dependent Deep-Web Databases
Increasingly, many data sources appear as online databases, hidden behind query forms, thus forming what is referred to as the deep web. It is desirable to have systems that can pr...
Fan Wang, Gagan Agrawal, Ruoming Jin
SDM
2004
SIAM
211views Data Mining» more  SDM 2004»
13 years 11 months ago
Using Support Vector Machines for Classifying Large Sets of Multi-Represented Objects
Databases are a key technology for molecular biology which is a very data intensive discipline. Since molecular biological databases are rather heterogeneous, unification and data...
Hans-Peter Kriegel, Peer Kröger, Alexey Pryak...