Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
Gold standard mappings created by experts are at the core of alignment evaluation. At the same time, the process of manual evaluation is rarely discussed. While the practice of ha...
Anna Tordai, Jacco van Ossenbruggen, Guus Schreibe...
We address the problem of musical sequence comparison for melodic similarity. Starting with a very simple similarity measure, we improve it step-by-step to finally obtain an acce...
T. Kadota, Masahiro Hirao, Akira Ishino, Masayuki ...
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Time series representations are common in MIR applications such as query-by-humming, where a sung query might be represented by a series of ‘notes’ for database retrieval. Whi...
Norman H. Adams, Mark A. Bartsch, Jonah Shifrin, G...