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BMCBI
2004
126views more  BMCBI 2004»
13 years 10 months ago
A probabilistic model for the evolution of RNA structure
Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
Ian Holmes
QUESTA
1998
124views more  QUESTA 1998»
13 years 9 months ago
Structural results for the control of queueing systems using event-based dynamic programming
In this paper we study monotonicity results for optimal policies of various queueing and resource sharing models. The standard approach is to propagate, for each specific model, ...
Ger Koole
BMCBI
2005
105views more  BMCBI 2005»
13 years 10 months ago
Secondary structure assignment that accurately reflects physical and evolutionary characteristics
Background: Secondary structure is used in hierarchical classification of protein structures, identification of protein features, such as helix caps and loops, for fold recognitio...
Maria Vittoria Cubellis, Fabien Cailliez, Simon C....
ALMOB
2008
82views more  ALMOB 2008»
13 years 10 months ago
Protein sequence and structure alignments within one framework
Background: Protein structure alignments are usually based on very different techniques to sequence alignments. We propose a method which treats sequence, structure and even combi...
Gundolf Schenk, Thomas Margraf, Andrew E. Torda
BMCBI
2008
71views more  BMCBI 2008»
13 years 10 months ago
A tale of two symmetrical tails: Structural and functional characteristics of palindromes in proteins
Background: It has been previously shown that palindromic sequences are frequently observed in proteins. However, our knowledge about their evolutionary origin and their possible ...
Armita Sheari, Mehdi Kargar, Ali Katanforoush, Sha...