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» Evolution of Biological Complexity
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APLAS
2007
ACM
14 years 1 months ago
Scalable Simulation of Cellular Signaling Networks
Abstract. Given the combinatorial nature of cellular signalling pathways, where biological agents can bind and modify each other in a large number of ways, concurrent or agent-base...
Vincent Danos, Jérôme Feret, Walter F...
BIBE
2004
IEEE
160views Bioinformatics» more  BIBE 2004»
14 years 1 months ago
A Time Series Analysis of Microarray Data
As the capture and analysis of single-time-point microarray expression data becomes routine, investigators are turning to time-series expression data to investigate complex gene r...
Selnur Erdal, Ozgur Ozturk, David L. Armbruster, H...
FAST
2008
14 years 5 days ago
Improving I/O Performance of Applications through Compiler-Directed Code Restructuring
Ever-increasing complexity of large-scale applications and continuous increases in sizes of the data they process make the problem of maximizing performance of such applications a...
Mahmut T. Kandemir, Seung Woo Son, Mustafa Karak&o...
DNA
2008
Springer
13 years 11 months ago
A Simple DNA Gate Motif for Synthesizing Large-Scale Circuits
The prospects of programming molecular systems to perform complex autonomous tasks has motivated research into the design of synthetic biochemical circuits. Of particular interest ...
Lulu Qian, Erik Winfree
DAGSTUHL
2010
13 years 11 months ago
Visual Simulation of Flow
We have adopted a numerical method from computational fluid dynamics, the Lattice Boltzmann Method (LBM), for real-time simulation and visualization of flow and amorphous phenomen...
Arie E. Kaufman, Ye Zhao