In the paper, two evolutionary approaches to the general DNA sequencing problem, assuming both negative and positive errors in the spectrum, are compared. The older of them is base...
Finding motifs — patterns of conserved residues — within nucleotide and protein sequences is a key part of understanding function and regulation within biological systems. Thi...
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...
In a paper [1] presented to BICS 2006, a basic methodology for microprocessor design automation using DNA sequences was proposed. A refined methodology with new schemes for travers...
This paper considers the problem of inferring an original sequence from a number of erroneous copies. The problem arises in DNA sequencing, particularly in the context of emerging...
Jonathan M. Keith, Peter Adams, Darryn E. Bryant, ...