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BMCBI
2010
141views more  BMCBI 2010»
13 years 11 months ago
Computing and visually analyzing mutual information in molecular co-evolution
Background: Selective pressure in molecular evolution leads to uneven distributions of amino acids and nucleotides. In fact one observes correlations among such constituents due t...
Sebastian Bremm, Tobias Schreck, Patrick Boba, Ste...
BMCBI
2010
118views more  BMCBI 2010»
13 years 11 months ago
Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests
Background: To understand the evolutionary role of Lateral Gene Transfer (LGT), accurate methods are needed to identify transferred genes and infer their timing of acquisition. Ph...
Sophie S. Abby, Eric Tannier, Manolo Gouy, Vincent...
BMCBI
2008
140views more  BMCBI 2008»
13 years 11 months ago
FUNYBASE: a FUNgal phYlogenomic dataBASE
Background: The increasing availability of fungal genome sequences provides large numbers of proteins for evolutionary and phylogenetic analyses. However the heterogeneity of data...
Sylvain Marthey, Gabriela Aguileta, Françoi...
GECCO
2009
Springer
131views Optimization» more  GECCO 2009»
13 years 8 months ago
A multi-objective approach to data sharing with privacy constraints and preference based objectives
Public data sharing is utilized in a number of businesses to facilitate the exchange of information. Privacy constraints are usually enforced to prevent unwanted inference of info...
Rinku Dewri, Darrell Whitley, Indrajit Ray, Indrak...
BMCBI
2011
13 years 6 months ago
Simulated evolution applied to study the genetic code optimality using a model of codon reassignments
Background: As the canonical code is not universal, different theories about its origin and organization have appeared. The optimization or level of adaptation of the canonical ge...
Jose Santos, Ángel Monteagudo