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CORR
2000
Springer
112views Education» more  CORR 2000»
15 years 2 months ago
Evolution of differentiated expression patterns in digital organisms
Abstract. We investigate the evolutionary processes behind the development and optimization of multiple threads of execution in digital organisms using the avida platform, a softwa...
Charles Ofria, Christoph Adami, Travis C. Collier,...
GPEM
2006
97views more  GPEM 2006»
15 years 2 months ago
Evolving recursive programs by using adaptive grammar based genetic programming
Genetic programming (GP) extends traditional genetic algorithms to automatically induce computer programs. GP has been applied in a wide range of applications such as software ree...
Man Wong
BMCBI
2011
14 years 6 months ago
Estimation of allele frequency and association mapping using next-generation sequencing data
Background: Estimation of allele frequency is of fundamental importance in population genetic analyses and in association mapping. In most studies using next-generation sequencing...
Su Yeon Kim, Kirk E. Lohmueller, Anders Albrechtse...
BMCBI
2010
177views more  BMCBI 2010»
15 years 2 months ago
Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
Background: Phylogenetic analysis can be used to divide a protein family into subfamilies in the absence of experimental information. Most phylogenetic analysis methods utilize mu...
Aydin Albayrak, Hasan H. Otu, Ugur O. Sezerman
130
Voted
BMCBI
2010
118views more  BMCBI 2010»
15 years 2 months ago
Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests
Background: To understand the evolutionary role of Lateral Gene Transfer (LGT), accurate methods are needed to identify transferred genes and infer their timing of acquisition. Ph...
Sophie S. Abby, Eric Tannier, Manolo Gouy, Vincent...