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IPPS
2009
IEEE
14 years 4 months ago
Accelerating error correction in high-throughput short-read DNA sequencing data with CUDA
Emerging DNA sequencing technologies open up exciting new opportunities for genome sequencing by generating read data with a massive throughput. However, produced reads are signif...
Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang...
PDCAT
2009
Springer
14 years 4 months ago
A Speculative Technique for Auto-Memoization Processor with Multithreading
—We have proposed an auto-memoization processor. This processor automatically and dynamically memoizes both functions and loop iterations, and skips their execution by reusing th...
Yushi Kamiya, Tomoaki Tsumura, Hiroshi Matsuo, Yas...
PVM
2009
Springer
14 years 4 months ago
MPI on a Million Processors
Petascale machines with close to a million processors will soon be available. Although MPI is the dominant programming model today, some researchers and users wonder (and perhaps e...
Pavan Balaji, Darius Buntinas, David Goodell, Will...
GCC
2007
Springer
14 years 3 months ago
A Component Based Interoperability Solution over Existing Grid Middleware
The purpose of grid technology is to integrate various heterogeneous resources together to provide huge computation and storage capacity for users transparently. However, current ...
Weiyuan Huang, Yongwei Wu, Jia Liu, Guangwen Yang,...
GECCO
2007
Springer
158views Optimization» more  GECCO 2007»
14 years 3 months ago
Using group selection to evolve leadership in populations of self-replicating digital organisms
This paper describes a study in the evolution of distributed cooperative behavior, specifically leader election, through digital evolution and group selection. In digital evoluti...
David B. Knoester, Philip K. McKinley, Charles Ofr...