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BMCBI
2006
147views more  BMCBI 2006»
13 years 6 months ago
A hidden Markov model approach for determining expression from genomic tiling micro arrays
Background: Genomic tiling micro arrays have great potential for identifying previously undiscovered coding as well as non-coding transcription. To-date, however, analyses of thes...
Kasper Munch, Paul P. Gardner, Peter Arctander, An...
BMCBI
2011
12 years 10 months ago
Combinatorial analysis and algorithms for quasispecies reconstruction using next-generation sequencing
Background: Next-generation sequencing (NGS) offers a unique opportunity for high-throughput genomics and has potential to replace Sanger sequencing in many fields, including de-n...
Mattia C. F. Prosperi, Luciano Prosperi, Alessandr...
ENTCS
2007
115views more  ENTCS 2007»
13 years 6 months ago
A Global Algorithm for Model-Based Test Suite Generation
Abstract. Model-based testing has been proposed as a technique to automatically verify that a system conforms to its specification. A popular approach is to use a model-checker to...
Anders Hessel, Paul Pettersson
BMCBI
2010
135views more  BMCBI 2010»
13 years 6 months ago
Lists2Networks: Integrated analysis of gene/protein lists
Background: Systems biologists are faced with the difficultly of analyzing results from large-scale studies that profile the activity of many genes, RNAs and proteins, applied in ...
Alexander Lachmann, Avi Ma'ayan
BMCBI
2005
110views more  BMCBI 2005»
13 years 6 months ago
Considerations when using the significance analysis of microarrays (SAM) algorithm
Background: Users of microarray technology typically strive to use universally acceptable data analysis strategies to determine significant expression changes in their experiments...
Ola Larsson, Claes Wahlestedt, James A. Timmons