We propose an algorithm for estimating the common secondary structure, alignment, and posterior base pairing probabilities for two RNA sequences. A definition of structural align...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
Background: An algorithm is presented to compute a multiple structure alignment for a set of proteins and to generate a consensus (pseudo) protein which captures common substructu...
Abstract. We present a new derivative-free algorithm, ORBIT, for unconstrained local optimization of computationally expensive functions. A trust-region framework using interpolati...
Stefan M. Wild, Rommel G. Regis, Christine A. Shoe...
—Conflict free spectrum allocation for secondary users in cognitive networks is a challenging problem, since the accessible spectrum is shared among users. The problem becomes to...
Chengshi Zhao, Mingrui Zou, Bin Shen, Bumjung Kim,...
This paper proposes a data-driven method for concept-to-text generation, the task of automatically producing textual output from non-linguistic input. A key insight in our approac...