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ICASSP
2009
IEEE
14 years 21 days ago
Generating high performance pruned FFT implementations
We derive a recursive general-radix pruned Cooley-Tukey fast Fourier transform (FFT) algorithm in Kronecker product notation. The algorithm is compatible with vectorization and pa...
Franz Franchetti, Markus Püschel
BMCBI
2010
143views more  BMCBI 2010»
13 years 9 months ago
Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images
Background: Several algorithms have been proposed for detecting fluorescently labeled subcellular objects in microscope images. Many of these algorithms have been designed for spe...
Pekka Ruusuvuori, Tarmo Äijö, Sharif Cho...
GECCO
2009
Springer
14 years 3 months ago
Multiobjectivization for parameter estimation: a case-study on the segment polarity network of drosophila
Mathematical modeling for gene regulative networks (GRNs) provides an effective tool for hypothesis testing in biology. A necessary step in setting up such models is the estimati...
Tim Hohm, Eckart Zitzler
NIPS
2008
13 years 10 months ago
Clustering via LP-based Stabilities
A novel center-based clustering algorithm is proposed in this paper. We first formulate clustering as an NP-hard linear integer program and we then use linear programming and the ...
Nikos Komodakis, Nikos Paragios, Georgios Tziritas
BMCBI
2008
133views more  BMCBI 2008»
13 years 9 months ago
A Web-based and Grid-enabled dChip version for the analysis of large sets of gene expression data
Background: Microarray techniques are one of the main methods used to investigate thousands of gene expression profiles for enlightening complex biological processes responsible f...
Luca Corradi, Marco Fato, Ivan Porro, Silvia Scagl...