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» Experimental Evaluation of BSP Programming Libraries
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JCC
2011
109views more  JCC 2011»
13 years 20 days ago
VoteDock: Consensus docking method for prediction of protein-ligand interactions
: Molecular recognition plays a fundamental role in all biological processes, and that is why great efforts have been made to understand and predict protein–ligand interactions. ...
Dariusz Plewczynski, Michal Lazniewski, Marcin von...
ML
2008
ACM
13 years 9 months ago
Unrestricted pure call-by-value recursion
Call-by-value languages commonly restrict recursive definitions by only allowing functions and syntactically explicit values in the right-hand sides. As a consequence, some very a...
Johan Nordlander, Magnus Carlsson, Andy Gill
PLDI
2005
ACM
14 years 3 months ago
Jungloid mining: helping to navigate the API jungle
Reuse of existing code from class libraries and frameworks is often difficult because APIs are complex and the client code required to use the APIs can be hard to write. We obser...
David Mandelin, Lin Xu, Rastislav Bodík, Do...
KBSE
2007
IEEE
14 years 4 months ago
Parseweb: a programmer assistant for reusing open source code on the web
Programmers commonly reuse existing frameworks or libraries to reduce software development efforts. One common problem in reusing the existing frameworks or libraries is that the...
Suresh Thummalapenta, Tao Xie
BMCBI
2010
137views more  BMCBI 2010»
13 years 10 months ago
BS Seeker: precise mapping for bisulfite sequencing
Background: Bisulfite sequencing using next generation sequencers yields genome-wide measurements of DNA methylation at single nucleotide resolution. Traditional aligners are not ...
Pao-Yang Chen, Shawn Cokus, Matteo Pellegrini