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BMCBI
2010
152views more  BMCBI 2010»
13 years 8 months ago
FITBAR: a web tool for the robust prediction of prokaryotic regulons
Background: The binding of regulatory proteins to their specific DNA targets determines the accurate expression of the neighboring genes. The in silico prediction of new binding s...
Jacques Oberto
BMCBI
2008
103views more  BMCBI 2008»
13 years 8 months ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
ICWE
2004
Springer
14 years 1 months ago
An Empirical Study of Web Quality: Measuring the Web from Wroclaw University of Technology Campus
This work presents an empirical study on Web quality measurement. We evaluate the performance and reliability of Web as perceived by the end users located at the Wroclaw University...
Leszek Borzemski, Ziemowit Nowak
SEMWEB
2007
Springer
14 years 2 months ago
TaxoMap in the OAEI 2007 Alignment Contest
This paper presents our first participation in the OAEI 2007 campaign. It describes an approach to align taxonomies which relies on terminological and structural techniques applie...
Haïfa Zargayouna, Brigitte Safar, Chantal Rey...
BMCBI
2008
103views more  BMCBI 2008»
13 years 8 months ago
Detection of protein catalytic residues at high precision using local network properties
Background: Identifying the active site of an enzyme is a crucial step in functional studies. While protein sequences and structures can be experimentally characterized, determini...
Patrick Slama, Ioannis Filippis, Michael Lappe