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AUTOMATICA
2011
14 years 11 months ago
Sequential linear quadratic control of bilinear parabolic PDEs based on POD model reduction
We present a framework to solve a finite-time optimal control problem for parabolic partial differential equations (PDEs) with diffusivity-interior actuators, which is motivate...
Chao Xu, Yongsheng Ou, Eugenio Schuster
150
Voted
BMCBI
2011
14 years 11 months ago
A Platform for Processing Expression of Short Time Series (PESTS)
Background: Time course microarray profiles examine the expression of genes over a time domain. They are necessary in order to determine the complete set of genes that are dynamic...
Anshu Sinha, Marianthi Markatou
156
Voted
BMCBI
2011
14 years 11 months ago
Shape-based peak identification for ChIP-Seq
Background: The identification of binding targets for proteins using ChIP-Seq has gained popularity as an alternative to ChIP-chip. Sequencing can, in principle, eliminate artifac...
Valerie Hower, Steven N. Evans, Lior Pachter
BMCBI
2011
14 years 11 months ago
VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R
Background: Visualization of orthogonal (disjoint) or overlapping datasets is a common task in bioinformatics. Few tools exist to automate the generation of extensively-customizab...
Hanbo Chen, Paul C. Boutros
BMCBI
2011
14 years 11 months ago
Investigating the effect of paralogs on microarray gene-set analysis
Background: In order to interpret the results obtained from a microarray experiment, researchers often shift focus from analysis of individual differentially expressed genes to an...
Andre J. Faure, Cathal Seoighe, Nicola J. Mulder
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