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BMCBI
2011
14 years 7 months ago
A Simple Approach to Ranking Differentially Expressed Gene Expression Time Courses through Gaussian Process Regression
Background: The analysis of gene expression from time series underpins many biological studies. Two basic forms of analysis recur for data of this type: removing inactive (quiet) ...
Alfredo A. Kalaitzis, Neil D. Lawrence
DAGSTUHL
2007
15 years 5 months ago
Interdisciplinary Design Research for End-User Software Engineering
rocesses involve modeling – simplifying or abstracting some aspects of the problem domain in order to plan and evaluate design decisions. The use of representations to reason abo...
Alan F. Blackwell
135
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PPOPP
2009
ACM
16 years 4 months ago
Effective performance measurement and analysis of multithreaded applications
Understanding why the performance of a multithreaded program does not improve linearly with the number of cores in a sharedmemory node populated with one or more multicore process...
Nathan R. Tallent, John M. Mellor-Crummey
116
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GECCO
2007
Springer
201views Optimization» more  GECCO 2007»
15 years 9 months ago
A parallel framework for loopy belief propagation
There are many innovative proposals introduced in the literature under the evolutionary computation field, from which estimation of distribution algorithms (EDAs) is one of them....
Alexander Mendiburu, Roberto Santana, Jose Antonio...
145
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CSB
2005
IEEE
114views Bioinformatics» more  CSB 2005»
15 years 9 months ago
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fa...