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» Experiments in Parallel Clustering with DBSCAN
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BMCBI
2011
12 years 11 months ago
A user-friendly web portal for T-Coffee on supercomputers
Background: Parallel T-Coffee (PTC) was the first parallel implementation of the T-Coffee multiple sequence alignment tool. It is based on MPI and RMA mechanisms. Its purpose is t...
Josep Rius Torrento, Fernando Cores, Francesc Sols...
ICDCS
2012
IEEE
11 years 10 months ago
Combining Partial Redundancy and Checkpointing for HPC
Today’s largest High Performance Computing (HPC) systems exceed one Petaflops (1015 floating point operations per second) and exascale systems are projected within seven years...
James Elliott, Kishor Kharbas, David Fiala, Frank ...
IPPS
2007
IEEE
14 years 2 months ago
Babel Remote Method Invocation
Babel is a high-performance, n-way language interoperability tool for the HPC community that now includes support for distributed computing via Remote Method Invocation (RMI). We ...
Gary Kumfert, James Leek, Thomas Epperly
CLUSTER
2009
IEEE
13 years 11 months ago
Analytical modeling and optimization for affinity based thread scheduling on multicore systems
Abstract--This paper proposes an analytical model to estimate the cost of running an affinity-based thread schedule on multicore systems. The model consists of three submodels to e...
Fengguang Song, Shirley Moore, Jack Dongarra
ICDCS
2010
IEEE
13 years 11 months ago
A Spinning Join That Does Not Get Dizzy
— As network infrastructures with 10 Gb/s bandwidth and beyond have become pervasive and as cost advantages of large commodity-machine clusters continue to increase, research and...
Philip Werner Frey, Romulo Goncalves, Martin L. Ke...