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» Exploiting Vector Parallelism in Software Pipelined Loops
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BMCBI
2010
153views more  BMCBI 2010»
13 years 7 months ago
Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massi
Background: Massively parallel sequencing readouts of epigenomic assays are enabling integrative genome-wide analyses of genomic and epigenomic variation. Pash 3.0 performs sequen...
Cristian Coarfa, Fuli Yu, Christopher A. Miller, Z...
IPPS
2010
IEEE
13 years 5 months ago
A GPU-inspired soft processor for high-throughput acceleration
There is building interest in using FPGAs as accelerators for high-performance computing, but existing systems for programming them are so far inadequate. In this paper we propose...
Jeffrey Kingyens, J. Gregory Steffan
IEEEPACT
2007
IEEE
14 years 1 months ago
Performance Portable Optimizations for Loops Containing Communication Operations
Effective use of communication networks is critical to the performance and scalability of parallel applications. Partitioned Global Address Space languages like UPC bring the pro...
Costin Iancu, Wei Chen, Katherine A. Yelick
HPDC
2008
IEEE
14 years 2 months ago
XenLoop: a transparent high performance inter-vm network loopback
Advances in virtualization technology have focused mainly on strengthening the isolation barrier between virtual machines (VMs) that are co-resident within a single physical machi...
Jian Wang, Kwame-Lante Wright, Kartik Gopalan
CC
2009
Springer
149views System Software» more  CC 2009»
14 years 8 months ago
Exploiting Speculative TLP in Recursive Programs by Dynamic Thread Prediction
Speculative parallelisation represents a promising solution to speed up sequential programs that are hard to parallelise otherwise. Prior research has focused mainly on parallelisi...
Lin Gao 0002, Lian Li 0002, Jingling Xue, Tin-Fook...