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» Exploring Heterogeneous Biological Databases: Tools and Appl...
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PODS
2003
ACM
104views Database» more  PODS 2003»
14 years 8 months ago
Maintaining time-decaying stream aggregates
We formalize the problem of maintaining time-decaying aggregates and statistics of a data stream: the relative contribution of each data item to the aggregate is scaled down by a ...
Edith Cohen, Martin Strauss
ICDE
2010
IEEE
750views Database» more  ICDE 2010»
14 years 1 months ago
Efficient and accurate discovery of patterns in sequence datasets
Existing sequence mining algorithms mostly focus on mining for subsequences. However, a large class of applications, such as biological DNA and protein motif mining, require effici...
Avrilia Floratou, Sandeep Tata, Jignesh M. Patel
BMCBI
2010
277views more  BMCBI 2010»
13 years 8 months ago
PCA2GO: a new multivariate statistics based method to identify highly expressed GO-Terms
Background: Several tools have been developed to explore and search Gene Ontology (GO) databases allowing efficient GO enrichment analysis and GO tree visualization. Nevertheless,...
Marc Bruckskotten, Mario Looso, Franz Cemic, Anne ...
CBMS
2007
IEEE
14 years 3 months ago
Multifaceted Hyperimage-Based Organization and Interaction with Bio-Medical Images
The abundance of complex media-rich information in state-of-the-art bio-medical sciences underlines the importance of paradigms for organizing, searching, browsing, and assimilati...
Rahul Singh, Pierre-Yves Corlobe
BMCBI
2010
162views more  BMCBI 2010»
13 years 8 months ago
Moara: a Java library for extracting and normalizing gene and protein mentions
Background: Gene/protein recognition and normalization are important preliminary steps for many biological text mining tasks, such as information retrieval, protein-protein intera...
Mariana L. Neves, José María Carazo,...