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BMCBI
2010
121views more  BMCBI 2010»
13 years 5 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
EWC
2010
178views more  EWC 2010»
13 years 5 months ago
Design of tensegrity structures using parametric analysis and stochastic search
Tensegrity structures are lightweight structures composed of cables in tension and struts in compression. Since tensegrity systems exhibit geometrically nonlinear behavior, findin...
Landolf Rhode-Barbarigos, Himanshu Jain, Prakash K...
BCB
2010
150views Bioinformatics» more  BCB 2010»
13 years 2 months ago
Enzymatic target identification with dynamic states
As a metabolic network reaches from a state to a steady state, a subset of its fluxes gradually change. The sequence of intermediate states, called the dynamic state, shows the pa...
Bin Song, Sanjay Ranka, Tamer Kahveci
JMLR
2011
192views more  JMLR 2011»
13 years 2 months ago
Minimum Description Length Penalization for Group and Multi-Task Sparse Learning
We propose a framework MIC (Multiple Inclusion Criterion) for learning sparse models based on the information theoretic Minimum Description Length (MDL) principle. MIC provides an...
Paramveer S. Dhillon, Dean P. Foster, Lyle H. Unga...
SIAMADS
2010
121views more  SIAMADS 2010»
13 years 2 months ago
Binocular Rivalry in a Competitive Neural Network with Synaptic Depression
We study binocular rivalry in a competitive neural network with synaptic depression. In particular, we consider two coupled hypercolums within primary visual cortex (V1), represent...
Zachary P. Kilpatrick, Paul C. Bressloff