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» External Memory Algorithms for String Problems
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PODS
2006
ACM
95views Database» more  PODS 2006»
14 years 7 months ago
Randomized computations on large data sets: tight lower bounds
We study the randomized version of a computation model (introduced in [9, 10]) that restricts random access to external memory and internal memory space. Essentially, this model c...
André Hernich, Martin Grohe, Nicole Schweik...
IPPS
1999
IEEE
13 years 11 months ago
Reducing I/O Complexity by Simulating Coarse Grained Parallel Algorithms
Block-wise access to data is a central theme in the design of efficient external memory (EM) algorithms. A second important issue, when more than one disk is present, is fully par...
Frank K. H. A. Dehne, David A. Hutchinson, Anil Ma...
STACS
1992
Springer
13 years 11 months ago
Speeding Up Two String-Matching Algorithms
We show how to speed up two string-matching algorithms: the Boyer-Moore algorithm (BM algorithm), and its version called here the reverse factor algorithm (RF algorithm). The RF al...
Maxime Crochemore, Thierry Lecroq, Artur Czumaj, L...
CIKM
2009
Springer
13 years 11 months ago
Suffix trees for very large genomic sequences
A suffix tree is a fundamental data structure for string searching algorithms. Unfortunately, when it comes to the use of suffix trees in real-life applications, the current metho...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
SODA
2012
ACM
174views Algorithms» more  SODA 2012»
11 years 10 months ago
Using hashing to solve the dictionary problem
We consider the dictionary problem in external memory and improve the update time of the wellknown buffer tree by roughly a logarithmic factor. For any λ ≥ max{lg lg n, logM/B(...
John Iacono, Mihai Patrascu