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» Extracting Ontologies from Relational Databases
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DEXAW
2003
IEEE
131views Database» more  DEXAW 2003»
14 years 3 months ago
Having a BLAST: Analyzing Gene Sequence Data with BlastQuest
An essential problem for biologists is the processing and evaluation of BLAST results. We advocate the deployment of database technology and describe a userdriven tool, called Bla...
William G. Farmerie, Joachim Hammer, Li Liu, Marku...
BMCBI
2008
153views more  BMCBI 2008»
13 years 10 months ago
Version VI of the ESTree db: an improved tool for peach transcriptome analysis
Background: The ESTree database (db) is a collection of Prunus persica and Prunus dulcis EST sequences that in its current version encompasses 75,404 sequences from 3 almond and 1...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
EMNLP
2009
13 years 7 months ago
Hypernym Discovery Based on Distributional Similarity and Hierarchical Structures
This paper presents a new method of developing a large-scale hyponymy relation database by combining Wikipedia and other Web documents. We attach new words to the hyponymy databas...
Ichiro Yamada, Kentaro Torisawa, Jun'ichi Kazama, ...
SAC
2008
ACM
13 years 9 months ago
Adding background knowledge to formal concept analysis via attribute dependency formulas
We present a way to add user's background knowledge to formal concept analysis. The type of background knowledge we deal with relates to relative importance of attributes in ...
Radim Belohlávek, Vilém Vychodil
BMCBI
2008
144views more  BMCBI 2008»
13 years 10 months ago
PDTD: a web-accessible protein database for drug target identification
Background: Target identification is important for modern drug discovery. With the advances in the development of molecular docking, potential binding proteins may be discovered b...
Zhenting Gao, Honglin Li, Hailei Zhang, Xiaofeng L...