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ALMOB
2007
74views more  ALMOB 2007»
13 years 9 months ago
Evaluating deterministic motif significance measures in protein databases
Background: Assessing the outcome of motif mining algorithms is an essential task, as the number of reported motifs can be very large. Significance measures play a central role in...
Pedro Gabriel Ferreira, Paulo J. Azevedo
ICSM
2006
IEEE
14 years 3 months ago
Working Session: Information Retrieval Based Approaches in Software Evolution
During software evolution a collection of related artifacts with different representations are created. Some of these are composed of structured data (e.g., analysis data), some c...
Andrian Marcus, Andrea De Lucia, Jane Huffman Haye...
INFORMATICALT
2002
110views more  INFORMATICALT 2002»
13 years 8 months ago
Extraction of Object-oriented Schemas from Existing Relational Databases: a Form-driven Approach
In this paper, we present our Form-driven approach for reverse engineering of relationa databases. This methodology uses the information extracted from both form structure and inst...
Mimoun Malki, André Flory, Mustapha Kamal R...
BMCBI
2006
112views more  BMCBI 2006»
13 years 9 months ago
Protein disorder prediction by condensed PSSM considering propensity for order or disorder
Background: More and more disordered regions have been discovered in protein sequences, and many of them are found to be functionally significant. Previous studies reveal that dis...
Chung-Tsai Su, Chien-Yu Chen, Yu-Yen Ou
BMCBI
2006
161views more  BMCBI 2006»
13 years 9 months ago
A method for rapid similarity analysis of RNA secondary structures
Background: Owing to the rapid expansion of RNA structure databases in recent years, efficient methods for structure comparison are in demand for function prediction and evolution...
Na Liu, Tianming Wang