112 search results - page 19 / 23 » FPGA-Based Multigrid Computation for Molecular Dynamics Simu... |
BMCBI
2010
13 years 7 months ago
2010
Background: The system-level dynamics of many molecular interactions, particularly protein-protein interactions, can be conveniently represented using reaction rules, which can be...
BMCBI
2006
13 years 7 months ago
2006
Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
IJHPCA
2008
13 years 7 months ago
2008
We present a de novo hierarchical simulation framework for first-principles based predictive simulations of materials and their validation on high-end parallel supercomputers and ...
ERSA
2007
13 years 8 months ago
2007
Molecular Dynamics simulations have become an interesting target for acceleration using Field-Programmable Gate Arrays (FPGA). Still to be attempted completely in FPGA hardware is...
CEC
2005
IEEE
14 years 21 days ago
2005
IEEE
Energy minimization algorithms for bio-molecular systems are critical to applications such as the prediction of protein folding. Conventional energy minimization methods such as th...