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» Fast Algorithms for Finding Extremal Sets
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STOC
2003
ACM
193views Algorithms» more  STOC 2003»
14 years 7 months ago
Space efficient dynamic stabbing with fast queries
In dynamic stabbing, we operate on a dynamic set of intervals. A stabbing query asks for an interval containing a given point. This basic problem encodes problems such as method l...
Mikkel Thorup
CMPB
2010
152views more  CMPB 2010»
13 years 7 months ago
Fast free-form deformation using graphics processing units
A large number of algorithms have been developed to perform non-rigid registration and it is a tool commonly used in medical image analysis. The FreeForm Deformation algorithm is ...
Marc Modat, Gerard R. Ridgway, Zeike A. Taylor, Ma...
BMCBI
2005
132views more  BMCBI 2005»
13 years 7 months ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer
CVPR
2008
IEEE
14 years 9 months ago
Learning and using taxonomies for fast visual categorization
The computational complexity of current visual categorization algorithms scales linearly at best with the number of categories. The goal of classifying simultaneously Ncat = 104 -...
Gregory Griffin, Darya Perona
BMCBI
2010
144views more  BMCBI 2010»
13 years 7 months ago
Finding sRNA generative locales from high-throughput sequencing data with NiBLS
Background: Next-generation sequencing technologies allow researchers to obtain millions of sequence reads in a single experiment. One important use of the technology is the seque...
Daniel MacLean, Vincent Moulton, David J. Studholm...