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» Fast Computation of Data Correlation Using BDDs
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BMCBI
2010
193views more  BMCBI 2010»
13 years 8 months ago
Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements
Background: Affymetrix GeneChip microarrays are popular platforms for expression profiling in two types of studies: detection of differential expression computed by p-values of t-...
Jakub Mieczkowski, Magdalena E. Tyburczy, Michal D...
P2P
2009
IEEE
137views Communications» more  P2P 2009»
14 years 3 months ago
Analysis of Failure Correlation Impact on Peer-to-Peer Storage Systems
Abstract—Peer-to-peer storage systems aim to provide a reliable long-term storage at low cost. In such systems, peers fail continuously, hence, the necessity of self-repairing me...
Olivier Dalle, Frédéric Giroire, Jul...
BMCBI
2008
102views more  BMCBI 2008»
13 years 8 months ago
Fast splice site detection using information content and feature reduction
Background: Accurate identification of splice sites in DNA sequences plays a key role in the prediction of gene structure in eukaryotes. Already many computational methods have be...
A. K. M. A. Baten, Saman K. Halgamuge, Bill C. H. ...
BMCBI
2008
126views more  BMCBI 2008»
13 years 8 months ago
c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
Katerina Kechris, Hao Li
NIPS
2008
13 years 10 months ago
Extracting State Transition Dynamics from Multiple Spike Trains with Correlated Poisson HMM
Neural activity is non-stationary and varies across time. Hidden Markov Models (HMMs) have been used to track the state transition among quasi-stationary discrete neural states. W...
Kentaro Katahira, Jun Nishikawa, Kazuo Okanoya, Ma...