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AI
2008
Springer
13 years 9 months ago
An approach to efficient planning with numerical fluents and multi-criteria plan quality
Dealing with numerical information is practically important in many real-world planning domains where the executability of an action can depend on certain numerical conditions, an...
Alfonso Gerevini, Alessandro Saetti, Ivan Serina
ALMOB
2008
95views more  ALMOB 2008»
13 years 9 months ago
A stitch in time: Efficient computation of genomic DNA melting bubbles
Background: It is of biological interest to make genome-wide predictions of the locations of DNA melting bubbles using statistical mechanics models. Computationally, this poses th...
Eivind Tøstesen
BMCBI
2010
112views more  BMCBI 2010»
13 years 9 months ago
Orientation-dependent backbone-only residue pair scoring functions for fixed backbone protein design
Background: Empirical scoring functions have proven useful in protein structure modeling. Most such scoring functions depend on protein side chain conformations. However, backbone...
Andrew J. Bordner
BMCBI
2010
137views more  BMCBI 2010»
13 years 9 months ago
BS Seeker: precise mapping for bisulfite sequencing
Background: Bisulfite sequencing using next generation sequencers yields genome-wide measurements of DNA methylation at single nucleotide resolution. Traditional aligners are not ...
Pao-Yang Chen, Shawn Cokus, Matteo Pellegrini
BMCBI
2010
175views more  BMCBI 2010»
13 years 9 months ago
Calibur: a tool for clustering large numbers of protein decoys
Background: Ab initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. The decoy with the most number of neighbors of...
Shuai Cheng Li, Yen Kaow Ng
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