In order to compute polarization energy of biomolecules, we describe a boundary element approach to solving the linearized Poisson–Boltzmann equation. Our approach combines sever...
Chandrajit L. Bajaj, Shun-Chuan Albert Chen, Alexa...
Large-scale comparison of genomic DNA is of fundamental importance in annotating functional elements of genomes. To perform large comparisons efficiently, BLAST (Methods: Companio...
The class of finite Sturmian words consists of words having particularly simple compressed representation, which is a generalization of the Fibonacci recurrence for Fibonacci word...
In this paper we describe some certified algorithms for exact real arithmetic based on co-recursion. Our work is based on previous experiences using redundant digits of base 2 but ...
The wire length estimation is the bottleneck of packing based block placers. To cope with this problem, we present a fast wire length estimation method in this paper. The key idea...