41 search results - page 2 / 9 » Fast Motif Selection for Biological Sequences |
BMCBI
2006
13 years 7 months ago
2006
Background: Many vital biological processes, including transcription and splicing, require a combination of short, degenerate sequence patterns, or motifs, adjacent to defined seq...
CSR
2006
Springer
13 years 11 months ago
2006
Springer
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
RECOMB
2008
Springer
14 years 7 months ago
2008
Springer
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
BMCBI
2010
13 years 7 months ago
2010
Background: While multiple alignment is the first step of usual classification schemes for biological sequences, alignment-free methods are being increasingly used as alternatives...
BMCBI
2011
12 years 11 months ago
2011
Background: One of the strategies for protein function annotation is to search particular structural motifs that are known to be shared by proteins with a given function. Results:...