The approximate string matching problem is to find all locations at which a query of length m matches a substring of a text of length n with k-or-fewer differences. Simple and prac...
Performance tuning is an important and time consuming task which may have to be repeated for each new application and platform. Although iterative optimisation can automate this p...
This paper presents Swift, a packet filter for high performance packet capture on commercial off-the-shelf hardware. The key features of Swift include (1) extremely low filter upd...
Background: Solving bioinformatics tasks often requires extensive computational power. Recent trends in processor architecture combine multiple cores into a single chip to improve...
Background: The amount of available biological information is rapidly increasing and the focus of biological research has moved from single components to networks and even larger ...
Stephanie Heinen, Bernhard Thielen, Dietmar Schomb...