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BMCBI
2010
163views more  BMCBI 2010»
13 years 8 months ago
Reduced representation of protein structure: implications on efficiency and scope of detection of structural similarity
Background: Computational comparison of two protein structures is the starting point of many methods that build on existing knowledge, such as structure modeling (including modeli...
Zong Hong Zhang, Hwee Kuan Lee, Ivana Mihalek
VLDB
2000
ACM
114views Database» more  VLDB 2000»
13 years 11 months ago
The A-tree: An Index Structure for High-Dimensional Spaces Using Relative Approximation
We propose a novel index structure, A-tree (Approximation tree), for similarity search of high-dimensional data. The basic idea of the
Yasushi Sakurai, Masatoshi Yoshikawa, Shunsuke Uem...
BMCBI
2006
249views more  BMCBI 2006»
13 years 8 months ago
Gene functional similarity search tool (GFSST)
Background: With the completion of the genome sequences of human, mouse, and other species and the advent of high throughput functional genomic research technologies such as biomi...
Peisen Zhang, Jinghui Zhang, Huitao Sheng, James J...
ADC
2008
Springer
139views Database» more  ADC 2008»
14 years 2 months ago
Computing Structural Similarity of Source XML Schemas against Domain XML Schema
In this paper, we study the problem of measuring structural similarities of large number of source schemas against a single domain schema, which is useful for enhancing the qualit...
Jianxin Li, Chengfei Liu, Jeffrey Xu Yu, Jixue Liu...
NAR
2008
122views more  NAR 2008»
13 years 8 months ago
SIMAP - structuring the network of protein similarities
Protein sequences are the most important source of evolutionary and functional information for new proteins. In order to facilitate the computationally intensive tasks of sequence...
Thomas Rattei, Patrick Tischler, Roland Arnold, Fr...