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DATESO
2007
157views Database» more  DATESO 2007»
13 years 9 months ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal
PODS
2005
ACM
127views Database» more  PODS 2005»
14 years 8 months ago
FTW: fast similarity search under the time warping distance
Time-series data naturally arise in countless domains, such as meteorology, astrophysics, geology, multimedia, and economics. Similarity search is very popular, and DTW (Dynamic T...
Yasushi Sakurai, Masatoshi Yoshikawa, Christos Fal...
ICDE
2002
IEEE
143views Database» more  ICDE 2002»
14 years 9 months ago
Discovering Similar Multidimensional Trajectories
We investigate techniques for analysis and retrieval of object trajectories in a two or three dimensional space. Such kind of data usually contain a great amount of noise, that ma...
Michail Vlachos, Dimitrios Gunopulos, George Kolli...
EDBT
2004
ACM
172views Database» more  EDBT 2004»
14 years 8 months ago
Efficient Similarity Search for Hierarchical Data in Large Databases
Structured and semi-structured object representations are getting more and more important for modern database applications. Examples for such data are hierarchical structures inclu...
Karin Kailing, Hans-Peter Kriegel, Stefan Schö...
BMCBI
2008
123views more  BMCBI 2008»
13 years 8 months ago
Shape based indexing for faster search of RNA family databases
Background: Most non-coding RNA families exert their function by means of a conserved, common secondary structure. The Rfam data base contains more than five hundred structurally ...
Stefan Janssen, Jens Reeder, Robert Giegerich