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» Fast and Accurate Alignment of Multiple Protein Networks
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BMCBI
2005
130views more  BMCBI 2005»
13 years 7 months ago
Squid - a simple bioinformatics grid
Background: BLAST is a widely used genetic research tool for analysis of similarity between nucleotide and protein sequences. This paper presents a software application entitled &...
Paulo C. Carvalho, Rafael V. Glória, Antoni...
WABI
2010
Springer
167views Bioinformatics» more  WABI 2010»
13 years 5 months ago
Quantifying the Strength of Natural Selection of a Motif Sequence
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
Chen-Hsiang Yeang
GECCO
2008
Springer
155views Optimization» more  GECCO 2008»
13 years 8 months ago
Towards memoryless model building
Probabilistic model building methods can render difficult problems feasible by identifying and exploiting dependencies. They build a probabilistic model from the statistical prope...
David Iclanzan, Dumitru Dumitrescu
JMLR
2010
157views more  JMLR 2010»
13 years 5 months ago
Kronecker Graphs: An Approach to Modeling Networks
How can we generate realistic networks? In addition, how can we do so with a mathematically tractable model that allows for rigorous analysis of network properties? Real networks ...
Jure Leskovec, Deepayan Chakrabarti, Jon M. Kleinb...
CONEXT
2009
ACM
13 years 8 months ago
RFDump: an architecture for monitoring the wireless ether
Networking researchers have been using tools like wireshark and tcpdump to sniff packets on physical links that use different types of datalink protocols, e.g. Ethernet or 802.11,...
Kaushik Lakshminarayanan, Samir Sapra, Srinivasan ...