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CF
2007
ACM
14 years 1 months ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...
NSDI
2008
14 years 4 days ago
Swift: A Fast Dynamic Packet Filter
This paper presents Swift, a packet filter for high performance packet capture on commercial off-the-shelf hardware. The key features of Swift include (1) extremely low filter upd...
Zhenyu Wu, Mengjun Xie, Haining Wang
ASPLOS
2008
ACM
13 years 11 months ago
Tapping into the fountain of CPUs: on operating system support for programmable devices
The constant race for faster and more powerful CPUs is drawing to a close. No longer is it feasible to significantly increase the speed of the CPU without paying a crushing penalt...
Yaron Weinsberg, Danny Dolev, Tal Anker, Muli Ben-...
BIRD
2008
Springer
141views Bioinformatics» more  BIRD 2008»
13 years 11 months ago
Nested q-Partial Graphs for Genetic Network Inference from "Small n, Large p" Microarray Data
Abstract. Gaussian graphical models are widely used to tackle the important and challenging problem of inferring genetic regulatory networks from expression data. These models have...
Kevin Kontos, Gianluca Bontempi
MSS
1999
IEEE
166views Hardware» more  MSS 1999»
14 years 2 months ago
A 64-bit, Shared Disk File System for Linux
In computer systems today, speed and responsiveness is often determined by network and storage subsystem performance. Faster, more scalable networking interfaces like Fibre Channe...
Kenneth W. Preslan, Andrew P. Barry, Jonathan Bras...