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IPL
2008
114views more  IPL 2008»
13 years 7 months ago
Faster algorithms for guided tree edit distance
The guided tree edit distance problem is to find a minimum cost series of edit operations that transforms two input forests F and G into isomorphic forests F and G such that a thi...
Dekel Tsur
BMCBI
2011
12 years 11 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
NGITS
1997
Springer
13 years 11 months ago
Faster Joins, Self Joins and Multi-Way Joins Using Join Indices
We propose a new algorithm, called Stripe-join, for performing a join given a join index. Stripe-join is inspired by an algorithm called \Jive-join" developed by Li and Ross....
Hui Lei, Kenneth A. Ross
JCC
2006
69views more  JCC 2006»
13 years 7 months ago
Dramatic performance enhancements for the FASTER optimization algorithm
: FASTER is a combinatorial optimization algorithm useful for finding low-energy side-chain configurations in side-chain placement and protein design calculations. We present two s...
Benjamin D. Allen, Stephen L. Mayo
PKC
2004
Springer
158views Cryptology» more  PKC 2004»
14 years 24 days ago
Faster Scalar Multiplication on Koblitz Curves Combining Point Halving with the Frobenius Endomorphism
Let E be an elliptic curve defined over F2n . The inverse operation of point doubling, called point halving, can be done up to three times as fast as doubling. Some authors have t...
Roberto Maria Avanzi, Mathieu Ciet, Francesco Sica