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PSB
2001
13 years 9 months ago
A Multithreaded Parallel Implementation of a Dynamic Programming Algorithm for Sequence Comparison
This paper discusses the issues involved in implementing a dynamic programming algorithm for biological sequence comparison on a generalpurpose parallel computing platform based o...
W. S. Martins, Juan del Cuvillo, F. J. Useche, Kev...
IPPS
2006
IEEE
14 years 1 months ago
Parallel implementation of the replica exchange molecular dynamics algorithm on Blue Gene/L
The Replica Exchange method is a popular approach for studying the folding thermodynamics of small to modest size proteins in explicit solvent, since it is easily parallelized. Ho...
Maria Eleftheriou, Aleksandr Rayshubskiy, Jed W. P...
DOLAP
1999
ACM
14 years 7 days ago
A Dynamic Load Balancing Strategy for Parallel Datacube Computation
In recent years, OLAP technologies have become one of the important applications in the database industry. In particular, the datacube operation proposed in [5] receives strong at...
Seigo Muto, Masaru Kitsuregawa
TPDS
2008
106views more  TPDS 2008»
13 years 7 months ago
Security-Aware Resource Allocation for Real-Time Parallel Jobs on Homogeneous and Heterogeneous Clusters
Security is increasingly becoming an important issue in the design of real-time parallel applications, which are widely used in the industry and academic organizations. However, ex...
Tao Xie 0004, Xiao Qin
SIGPLAN
2008
13 years 7 months ago
A parallel dynamic compiler for CIL bytecode
Multi-core technology is being employed in most recent high-performance architectures. Such architectures need specifically designed multi-threaded software to exploit all the pot...
Simone Campanoni, Giovanni Agosta, Stefano Crespi-...