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TCAD
2008
128views more  TCAD 2008»
13 years 7 months ago
Obstacle-Avoiding Rectilinear Steiner Tree Construction Based on Spanning Graphs
Given a set of pins and a set of obstacles on a plane, an obstacle-avoiding rectilinear Steiner minimal tree (OARSMT) connects these pins, possibly through some additional points (...
Chung-Wei Lin, Szu-Yu Chen, Chi-Feng Li, Yao-Wen C...
BMCBI
2005
113views more  BMCBI 2005»
13 years 7 months ago
Pathway level analysis of gene expression using singular value decomposition
Background: A promising direction in the analysis of gene expression focuses on the changes in expression of specific predefined sets of genes that are known in advance to be rela...
John K. Tomfohr, Jun Lu, Thomas B. Kepler
EVOW
2010
Springer
13 years 6 months ago
Finding Gapped Motifs by a Novel Evolutionary Algorithm
Background: Identifying approximately repeated patterns, or motifs, in DNA sequences from a set of co-regulated genes is an important step towards deciphering the complex gene reg...
Chengwei Lei, Jianhua Ruan
PKDD
2010
Springer
188views Data Mining» more  PKDD 2010»
13 years 5 months ago
Semi-supervised Abstraction-Augmented String Kernel for Multi-level Bio-Relation Extraction
ervised Abstraction-Augmented String Kernel for Multi-Level Bio-Relation Extraction Pavel Kuksa1 , Yanjun Qi2 , Bing Bai2 , Ronan Collobert2 , Jason Weston3 , Vladimir Pavlovic1 , ...
Pavel P. Kuksa, Yanjun Qi, Bing Bai, Ronan Collobe...
BMCBI
2011
13 years 2 months ago
nocoRNAc: Characterization of non-coding RNAs in prokaryotes
Background: The interest in non-coding RNAs (ncRNAs) constantly rose during the past few years because of the wide spectrum of biological processes in which they are involved. Thi...
Alexander Herbig, Kay Nieselt