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BMCBI
2005
148views more  BMCBI 2005»
13 years 7 months ago
Nonparametric tests for differential gene expression and interaction effects in multi-factorial microarray experiments
Background: Numerous nonparametric approaches have been proposed in literature to detect differential gene expression in the setting of two user-defined groups. However, there is ...
Xin Gao, Peter X. K. Song
BMCBI
2010
151views more  BMCBI 2010»
13 years 7 months ago
TF-finder: A software package for identifying transcription factors involved in biological processes using microarray data and e
Background: Identification of transcription factors (TFs) involved in a biological process is the first step towards a better understanding of the underlying regulatory mechanisms...
Xiaoqi Cui, Tong Wang, Huann-Sheng Chen, Victor Bu...
ICML
2007
IEEE
14 years 8 months ago
Entire regularization paths for graph data
Graph data such as chemical compounds and XML documents are getting more common in many application domains. A main difficulty of graph data processing lies in the intrinsic high ...
Koji Tsuda
BMCBI
2004
185views more  BMCBI 2004»
13 years 7 months ago
Linear fuzzy gene network models obtained from microarray data by exhaustive search
Background: Recent technological advances in high-throughput data collection allow for experimental study of increasingly complex systems on the scale of the whole cellular genome...
Bahrad A. Sokhansanj, J. Patrick Fitch, Judy N. Qu...
ICDM
2008
IEEE
160views Data Mining» more  ICDM 2008»
14 years 2 months ago
Direct Zero-Norm Optimization for Feature Selection
Zero-norm, defined as the number of non-zero elements in a vector, is an ideal quantity for feature selection. However, minimization of zero-norm is generally regarded as a combi...
Kaizhu Huang, Irwin King, Michael R. Lyu