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» Finding Approximate Repeating Patterns from Sequence Data
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ECML
2006
Springer
13 years 11 months ago
Deconvolutive Clustering of Markov States
In this paper we formulate the problem of grouping the states of a discrete Markov chain of arbitrary order simultaneously with deconvolving its transition probabilities. As the na...
Ata Kabán, Xin Wang
STOC
2005
ACM
184views Algorithms» more  STOC 2005»
14 years 1 months ago
Coresets in dynamic geometric data streams
A dynamic geometric data stream consists of a sequence of m insert/delete operations of points from the discrete space {1, . . . , ∆}d [26]. We develop streaming (1 + )-approxim...
Gereon Frahling, Christian Sohler
TCSV
2008
150views more  TCSV 2008»
13 years 7 months ago
Mining Recurring Events Through Forest Growing
Recurring events are short temporal patterns that consist of multiple instances in the target database. Without any a priori knowledge of the recurring events, in terms of their le...
Junsong Yuan, Jingjing Meng, Ying Wu, Jiebo Luo
BMCBI
2006
120views more  BMCBI 2006»
13 years 8 months ago
An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse
Background: Many statistical algorithms combine microarray expression data and genome sequence data to identify transcription factor binding motifs in the low eukaryotic genomes. ...
Ryung S. Kim, Hongkai Ji, Wing Hung Wong
BMCBI
2004
146views more  BMCBI 2004»
13 years 7 months ago
Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
Feng Gao, Barrett C. Foat, Harmen J. Bussemaker