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BMCBI
2006
207views more  BMCBI 2006»
13 years 8 months ago
A new measure for functional similarity of gene products based on Gene Ontology
Background: Gene Ontology (GO) is a standard vocabulary of functional terms and allows for coherent annotation of gene products. These annotations provide a basis for new methods ...
Andreas Schlicker, Francisco S. Domingues, Jö...
BMCBI
2010
139views more  BMCBI 2010»
13 years 8 months ago
CMASA: an accurate algorithm for detecting local protein structural similarity and its application to enzyme catalytic site anno
Background: The rapid development of structural genomics has resulted in many "unknown function" proteins being deposited in Protein Data Bank (PDB), thus, the functiona...
Gong-Hua Li, Jing-Fei Huang
BMCBI
2008
173views more  BMCBI 2008»
13 years 8 months ago
Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
Background: Microarray experiments measure changes in the expression of thousands of genes. The resulting lists of genes with changes in expression are then searched for biologica...
Stephen W. Tanner, Pankaj Agarwal
ESWS
2007
Springer
13 years 11 months ago
Imprecise SPARQL: Towards a Unified Framework for Similarity-Based Semantic Web Tasks
This proposal explores a unified framework to solve Semantic Web tasks that often require similarity measures, such as RDF retrieval, ontology alignment, and semantic service match...
Christoph Kiefer
ECIR
2010
Springer
13 years 9 months ago
Finding Wormholes with Flickr Geotags
We propose a kernel convolution method to predict similar locations (wormholes) based on human travel behaviour. A scaling parameter can be used to define a set of relevant users t...
Maarten Clements, Pavel Serdyukov, Arjen P. de Vri...