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» Finding recurrent sources in sequences
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BMCBI
2008
75views more  BMCBI 2008»
13 years 7 months ago
Re-searcher: a system for recurrent detection of homologous protein sequences
Background: Sequence searches are routinely employed to detect and annotate related proteins. However, a rapid growth of databases necessitates a frequent repetition of sequence s...
Valdemaras Repsys, Mindaugas Margelevicius, Ceslov...
CSB
2003
IEEE
113views Bioinformatics» more  CSB 2003»
14 years 1 months ago
An Optimal DNA Segmentation Based on the MDL Principle
: The biological world is highly stochastic and inhomogeneous in its behaviour. There are regions in DNA with high concentration of G or C bases; stretches of sequences with an abu...
Wojciech Szpankowski, Wenhui Ren, Lukasz Szpankows...
BMCBI
2005
94views more  BMCBI 2005»
13 years 7 months ago
A method for finding single-nucleotide polymorphisms with allele frequencies in sequences of deep coverage
Background: The allele frequencies of single-nucleotide polymorphisms (SNPs) are needed to select an optimal subset of common SNPs for use in association studies. Sequence-based m...
Jianmin Wang, Xiaoqiu Huang
JMLR
2002
133views more  JMLR 2002»
13 years 7 months ago
Learning Precise Timing with LSTM Recurrent Networks
The temporal distance between events conveys information essential for numerous sequential tasks such as motor control and rhythm detection. While Hidden Markov Models tend to ign...
Felix A. Gers, Nicol N. Schraudolph, Jürgen S...
IPPS
2007
IEEE
14 years 2 months ago
Recurrent neural networks towards detection of SQL attacks
In the paper we present a new approach based on application of neural networks to detect SQL attacks. SQL attacks are those attacks that take advantage of using SQL statements to ...
Jaroslaw Skaruz, Franciszek Seredynski