Background: In plant mitochondria, the post-transcriptional RNA editing process converts C to U at a number of specific sites of the mRNA sequence and usually restores phylogeneti...
Following Zuker (1986), a saturated secondary structure for a given RNA sequence is a secondary structure such that no base pair can be added without violating the definition of s...
Abstract. Ambiguity in dynamic programming arises from two independent sources, the non-uniqueness of optimal solutions and the particular recursion scheme by which the search spac...
Background: In order to improve gene prediction, extrinsic evidence on the gene structure can be collected from various sources of information such as genome-genome comparisons an...
A number of effective error detection tools have been built in recent years to check if a program conforms to certain design rules. An important class of design rules deals with s...
Michael C. Martin, V. Benjamin Livshits, Monica S....