Sciweavers

81 search results - page 4 / 17
» Finding recurrent sources in sequences
Sort
View
BMCBI
2008
86views more  BMCBI 2008»
13 years 7 months ago
Is plant mitochondrial RNA editing a source of phylogenetic incongruence? An answer from in silico and in vivo data sets
Background: In plant mitochondria, the post-transcriptional RNA editing process converts C to U at a number of specific sites of the mRNA sequence and usually restores phylogeneti...
Ernesto Picardi, Carla Quagliariello
JCB
2006
126views more  JCB 2006»
13 years 7 months ago
Combinatorics of Saturated Secondary Structures of RNA
Following Zuker (1986), a saturated secondary structure for a given RNA sequence is a secondary structure such that no base pair can be added without violating the definition of s...
P. Clote
CPM
2000
Springer
143views Combinatorics» more  CPM 2000»
14 years 1 days ago
Explaining and Controlling Ambiguity in Dynamic Programming
Abstract. Ambiguity in dynamic programming arises from two independent sources, the non-uniqueness of optimal solutions and the particular recursion scheme by which the search spac...
Robert Giegerich
BMCBI
2006
160views more  BMCBI 2006»
13 years 7 months ago
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
Background: In order to improve gene prediction, extrinsic evidence on the gene structure can be collected from various sources of information such as genome-genome comparisons an...
Mario Stanke, Oliver Schöffmann, Burkhard Mor...
OOPSLA
2005
Springer
14 years 1 months ago
Finding application errors and security flaws using PQL: a program query language
A number of effective error detection tools have been built in recent years to check if a program conforms to certain design rules. An important class of design rules deals with s...
Michael C. Martin, V. Benjamin Livshits, Monica S....