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SIGMOD
2009
ACM
180views Database» more  SIGMOD 2009»
16 years 4 months ago
Indexing correlated probabilistic databases
With large amounts of correlated probabilistic data being generated in a wide range of application domains including sensor networks, information extraction, event detection etc.,...
Bhargav Kanagal, Amol Deshpande
CSB
2005
IEEE
125views Bioinformatics» more  CSB 2005»
15 years 9 months ago
Discriminative Discovery of Transcription Factor Binding Sites from Location Data
Motivation: The availability of genome-wide location analyses based on chromatin immunoprecipitation (ChIP) data gives a new insight for in silico analysis of transcriptional regu...
Yuji Kawada, Yasubumi Sakakibara
FOCS
2009
IEEE
15 years 7 months ago
Space-Efficient Framework for Top-k String Retrieval Problems
Given a set D = {d1, d2, ..., dD} of D strings of total length n, our task is to report the "most relevant" strings for a given query pattern P. This involves somewhat mo...
Wing-Kai Hon, Rahul Shah, Jeffrey Scott Vitter
CSR
2006
Springer
15 years 7 months ago
Fast Motif Search in Protein Sequence Databases
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Elena Zheleva, Abdullah N. Arslan
WSC
2004
15 years 5 months ago
A Case Study in Meta-Simulation Design and Performance Analysis for Large-Scale Networks
Simulation and Emulation techniques are fundamental to aid the process of large-scale protocol design and network operations. However, the results from these techniques are often ...
David W. Bauer, Garrett R. Yaun, Christopher D. Ca...