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BMCBI
2010
149views more  BMCBI 2010»
13 years 8 months ago
KID - an algorithm for fast and efficient text mining used to automatically generate a database containing kinetic information o
Background: The amount of available biological information is rapidly increasing and the focus of biological research has moved from single components to networks and even larger ...
Stephanie Heinen, Bernhard Thielen, Dietmar Schomb...
BMCBI
2008
138views more  BMCBI 2008»
13 years 8 months ago
SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803
Background: Cyanobacteria are model organisms for studying photosynthesis, carbon and nitrogen assimilation, evolution of plant plastids, and adaptability to environmental stresse...
Woo-Yeon Kim, Sungsoo Kang, Byoung-Chul Kim, Jeehy...
KDD
2008
ACM
121views Data Mining» more  KDD 2008»
14 years 8 months ago
Reconstructing chemical reaction networks: data mining meets system identification
We present an approach to reconstructing chemical reaction networks from time series measurements of the concentrations of the molecules involved. Our solution strategy combines t...
Yong Ju Cho, Naren Ramakrishnan, Yang Cao
GIS
2008
ACM
14 years 9 months ago
Should SDBMS support a join index?: a case study from CrimeStat
Given a spatial crime data warehouse, that is updated infrequently and a set of operations O as well as constraints of storage and update overheads, the index type selection probl...
Pradeep Mohan, Ronald E. Wilson, Shashi Shekhar, B...
BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
A microarray data-based semi-kinetic method for predicting quantitative dynamics of genetic networks
Background: Elucidating the dynamic behaviour of genetic regulatory networks is one of the most significant challenges in systems biology. However, conventional quantitative predi...
Katsuyuki Yugi, Yoichi Nakayama, Shigen Kojima, To...