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» Fixed-Parameter Algorithms in Phylogenetics
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IPPS
2006
IEEE
14 years 3 months ago
Parallel implementation of a quartet-based algorithm for phylogenetic analysis
This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
ICCS
2001
Springer
14 years 2 months ago
High-Performance Algorithm Engineering for Computational Phylogenetics
Abstract. Phylogeny reconstruction from molecular data poses complex optimization problems: almost all optimization models are NP-hard and thus computationally intractable. Yet app...
Bernard M. E. Moret, David A. Bader, Tandy Warnow
RECOMB
2001
Springer
14 years 10 months ago
A structural EM algorithm for phylogenetic inference
Nir Friedman, Matan Ninio, Itsik Pe'er, Tal Pupko
CPM
1997
Springer
111views Combinatorics» more  CPM 1997»
14 years 1 months ago
Approximation Algorithms for the Fixed-Topology Phylogenetic Number Problem
Mary Cryan, Leslie Ann Goldberg, Cynthia A. Philli...