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» Fixed-Parameter Algorithms in Phylogenetics
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SWAT
2010
Springer
250views Algorithms» more  SWAT 2010»
14 years 13 days ago
Fixed-Parameter Algorithms for Cochromatic Number and Disjoint Rectangle Stabbing
Given a permutation π of {1, . . . , n} and a positive integer k, we give an algorithm with running time 2O(k2 log k) nO(1) that decides whether π can be partitioned into at mos...
Pinar Heggernes, Dieter Kratsch, Daniel Lokshtanov...
WG
2005
Springer
14 years 26 days ago
Fixed-Parameter Algorithms for Protein Similarity Search Under mRNA Structure Constraints
Abstract. In the context of protein engineering, we consider the problem of computing an mRNA sequence of maximal codon-wise similarity to a given mRNA (and consequently, to a give...
Guillaume Blin, Guillaume Fertin, Danny Hermelin, ...
KR
2010
Springer
14 years 5 days ago
Towards Fixed-Parameter Tractable Algorithms for Argumentation
Abstract argumentation frameworks have received a lot of interest in recent years. Most computational problems in this area are intractable but several tractable fragments have be...
Wolfgang Dvorák, Reinhard Pichler, Stefan W...
GD
2003
Springer
14 years 18 days ago
Fixed Parameter Algorithms for one-sided crossing minimization Revisited
We exhibit a small problem kernel for the one-sided crossing minimization problem. This problem plays an important role in graph drawing algorithms based on the Sugiyama layering ...
Vida Dujmovic, Henning Fernau, Michael Kaufmann