This paper describes an application of IR and text categorization methods to a highly practical problem in biomedicine, specifically, Gene Ontology (GO) annotation. GO annotation...
Many bioinformatics applications would benefit from comparing proteins based on their biological role rather than their sequence. In most biological databases, proteins are alrea...
Earlier this year, a major effort was initiated to study the theoretical and empirical aspects of the automatic detection of semantic concepts in broadcast video, complementing ong...
Background: In the context of the BioCreative competition, where training data were very sparse, we investigated two complementary tasks: 1) given a Swiss-Prot triplet, containing...
The success of the Semantic Web depends on the availability of ontologies as well as on the proliferation of web pages annotated with metadata conforming to these ontologies. Thus...
Philipp Cimiano, Siegfried Handschuh, Steffen Staa...