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» Framework for a Protein Ontology
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JCP
2008
121views more  JCP 2008»
13 years 8 months ago
Towards Design Space Exploration for Biological Systems
For both embedded systems and biological cell systems, design is a feature that defines their identity. The assembly of different components in designs of both systems can vary wid...
Simon Polstra, Tessa E. Pronk, Andy D. Pimentel, T...
ITSSA
2006
182views more  ITSSA 2006»
13 years 8 months ago
Application of Business Process Execution Language to Scientific Workflows
: This paper investigates the use of the Business Process Execution Language for Web services (BPEL4WS/ BPEL) for managing scientific workflows. The complexity, unpredictability an...
Asif Akram, David Meredith, Rob Allan
JCC
2006
103views more  JCC 2006»
13 years 8 months ago
Flooding in GROMACS: Accelerated barrier crossings in molecular dynamics
: The major bottleneck of today's atomistic molecular dynamics (MD) simulations is that because of the enormous computational effort involved, only processes at nanoseconds to...
Oliver F. Lange, Lars V. Schäfer, Helmut Grub...
NAR
2007
131views more  NAR 2007»
13 years 8 months ago
Snap: an integrated SNP annotation platform
Snap (Single Nucleotide Polymorphism Annotation Platform) is a server designed to comprehensively analyze single genes and relationships between genes basing on SNPs in the human ...
Shengting Li, Lijia Ma, Heng Li, Søren Vang...
JCC
2010
87views more  JCC 2010»
13 years 7 months ago
Crystal contacts as nature's docking solutions
The assumption that crystal contacts reflect natural macromolecular interactions makes a basis for many studies in structural biology. However, the crystal state may correspond t...
Evgeny B. Krissinel